SmilesT5: Domain-specific pretraining for molecular language models

Molecular property prediction is an increasingly critical task within drug discovery and development. Typically, neural networks can learn molecular properties using graph-based, language-based or feature-based methods. Recent advances in natural language processing have highlighted the capabilities of neural networks to learn complex human language using masked language modelling. These approaches to training large transformer-based deep learning models have also been used to learn the language of molecules, as represented by simplified molecular-input line-entry system (SMILES) strings. Here, we present novel domain-specific text-to-text pretraining tasks that yield improved performance in six classification-based molecular property prediction benchmarks, relative to both traditional likelihood-based training and previously proposed fine-tuning tasks. Through ablation studies, we show that data and computational efficiency can be improved by using these domain-specific pretraining tasks. Finally, the pretrained embeddings from the model can be used as fixed inputs into a downstream machine learning classifier and yield comparable performance to finetuning but with much lower computational overhead.

LoReUn: Data Itself Implicitly Provides Cues to Improve Machine Unlearning

Recent generative models face significant risks of producing harmful content, which has underscored the importance of machine unlearning (MU) as a critical technique for eliminating the influence of undesired data. However, existing MU methods typically assign the same weight to all data to be forgotten, which makes it difficult to effectively forget certain data that is harder to unlearn than others. In this paper, we empirically demonstrate that the loss of data itself can implicitly reflect its varying difficulty. Building on this insight, we introduce Loss-based Reweighting Unlearning (LoReUn), a simple yet effective plug-and-play strategy that dynamically reweights data during the unlearning process with minimal additional computational overhead. Our approach significantly reduces the gap between existing MU methods and exact unlearning in both image classification and generation tasks, effectively enhancing the prevention of harmful content generation in text-to-image diffusion models.

Resource-Efficient Adaptation of Large Language Models for Text Embeddings via Prompt Engineering and Contrastive Fine-tuning

Large Language Models (LLMs) have become a cornerstone in Natural Language Processing (NLP), achieving impressive performance in text generation. Their token-level representations capture rich, human-aligned semantics. However, pooling these vectors into a text embedding discards crucial information. Nevertheless, many non-generative downstream tasks, such as clustering, classification, or retrieval, still depend on accurate and controllable sentence- or document-level embeddings. We explore several adaptation strategies for pre-trained, decoder-only LLMs: (i) various aggregation techniques for token embeddings, (ii) task-specific prompt engineering, and (iii) text-level augmentation via contrastive fine-tuning. Combining these components yields state-of-the-art performance on the English clustering track of the Massive Text Embedding Benchmark (MTEB). An analysis of the attention map further shows that fine-tuning shifts focus from prompt tokens to semantically relevant words, indicating more effective compression of meaning into the final hidden state. Our experiments demonstrate that LLMs can be effectively adapted as text embedding models through a combination of prompt engineering and resource-efficient contrastive fine-tuning on synthetically generated positive pairs.

LLM-based Content Classification Approach for GitHub Repositories by the README Files

GitHub is the world's most popular platform for storing, sharing, and managing code. Every GitHub repository has a README file associated with it. The README files should contain project-related information as per the recommendations of GitHub to support the usage and improvement of repositories. However, GitHub repository owners sometimes neglected these recommendations. This prevents a GitHub repository from reaching its full potential. This research posits that the comprehensiveness of a GitHub repository's README file significantly influences its adoption and utilization, with a lack of detail potentially hindering its full potential for widespread engagement and impact within the research community. Large Language Models (LLMs) have shown great performance in many text-based tasks including text classification, text generation, text summarization and text translation. In this study, an approach is developed to fine-tune LLMs for automatically classifying different sections of GitHub README files. Three encoder-only LLMs are utilized, including BERT, DistilBERT and RoBERTa. These pre-trained models are then fine-tuned based on a gold-standard dataset consisting of 4226 README file sections. This approach outperforms current state-of-the-art methods and has achieved an overall F1 score of 0.98. Moreover, we have also investigated the use of Parameter-Efficient Fine-Tuning (PEFT) techniques like Low-Rank Adaptation (LoRA) and shown an economical alternative to full fine-tuning without compromising much performance. The results demonstrate the potential of using LLMs in designing an automatic classifier for categorizing the content of GitHub README files. Consequently, this study contributes to the development of automated tools for GitHub repositories to improve their identifications and potential usages.

HQ-CLIP: Leveraging Large Vision-Language Models to Create High-Quality Image-Text Datasets and CLIP Models

Large-scale but noisy image-text pair data have paved the way for the success of Contrastive Language-Image Pretraining (CLIP). As the foundation vision encoder, CLIP in turn serves as the cornerstone for most large vision-language models (LVLMs). This interdependence naturally raises an interesting question: Can we reciprocally leverage LVLMs to enhance the quality of image-text pair data, thereby opening the possibility of a self-reinforcing cycle for continuous improvement? In this work, we take a significant step toward this vision by introducing an LVLM-driven data refinement pipeline. Our framework leverages LVLMs to process images and their raw alt-text, generating four complementary textual formulas: long positive descriptions, long negative descriptions, short positive tags, and short negative tags. Applying this pipeline to the curated DFN-Large dataset yields VLM-150M, a refined dataset enriched with multi-grained annotations. Based on this dataset, we further propose a training paradigm that extends conventional contrastive learning by incorporating negative descriptions and short tags as additional supervised signals. The resulting model, namely HQ-CLIP, demonstrates remarkable improvements across diverse benchmarks. Within a comparable training data scale, our approach achieves state-of-the-art performance in zero-shot classification, cross-modal retrieval, and fine-grained visual understanding tasks. In retrieval benchmarks, HQ-CLIP even surpasses standard CLIP models trained on the DFN-2B dataset, which contains 10$\times$ more training data than ours. All code, data, and models are available at https://zxwei.site/hqclip.

MetaCLIP 2: A Worldwide Scaling Recipe

Contrastive Language-Image Pretraining (CLIP) is a popular foundation model, supporting from zero-shot classification, retrieval to encoders for multimodal large language models (MLLMs). Although CLIP is successfully trained on billion-scale image-text pairs from the English world, scaling CLIP's training further to learning from the worldwide web data is still challenging: (1) no curation method is available to handle data points from non-English world; (2) the English performance from existing multilingual CLIP is worse than its English-only counterpart, i.e., "curse of multilinguality" that is common in LLMs. Here, we present MetaCLIP 2, the first recipe training CLIP from scratch on worldwide web-scale image-text pairs. To generalize our findings, we conduct rigorous ablations with minimal changes that are necessary to address the above challenges and present a recipe enabling mutual benefits from English and non-English world data. In zero-shot ImageNet classification, MetaCLIP 2 ViT-H/14 surpasses its English-only counterpart by 0.8% and mSigLIP by 0.7%, and surprisingly sets new state-of-the-art without system-level confounding factors (e.g., translation, bespoke architecture changes) on multilingual benchmarks, such as CVQA with 57.4%, Babel-ImageNet with 50.2% and XM3600 with 64.3% on image-to-text retrieval.

ArtSeek: Deep artwork understanding via multimodal in-context reasoning and late interaction retrieval

Analyzing digitized artworks presents unique challenges, requiring not only visual interpretation but also a deep understanding of rich artistic, contextual, and historical knowledge. We introduce ArtSeek, a multimodal framework for art analysis that combines multimodal large language models with retrieval-augmented generation. Unlike prior work, our pipeline relies only on image input, enabling applicability to artworks without links to Wikidata or Wikipedia-common in most digitized collections. ArtSeek integrates three key components: an intelligent multimodal retrieval module based on late interaction retrieval, a contrastive multitask classification network for predicting artist, genre, style, media, and tags, and an agentic reasoning strategy enabled through in-context examples for complex visual question answering and artwork explanation via Qwen2.5-VL. Central to this approach is WikiFragments, a Wikipedia-scale dataset of image-text fragments curated to support knowledge-grounded multimodal reasoning. Our framework achieves state-of-the-art results on multiple benchmarks, including a +8.4% F1 improvement in style classification over GraphCLIP and a +7.1 BLEU@1 gain in captioning on ArtPedia. Qualitative analyses show that ArtSeek can interpret visual motifs, infer historical context, and retrieve relevant knowledge, even for obscure works. Though focused on visual arts, our approach generalizes to other domains requiring external knowledge, supporting scalable multimodal AI research. Both the dataset and the source code will be made publicly available at https://github.com/cilabuniba/artseek.

Text2VLM: Adapting Text-Only Datasets to Evaluate Alignment Training in Visual Language Models

The increasing integration of Visual Language Models (VLMs) into AI systems necessitates robust model alignment, especially when handling multimodal content that combines text and images. Existing evaluation datasets heavily lean towards text-only prompts, leaving visual vulnerabilities under evaluated. To address this gap, we propose \textbf{Text2VLM}, a novel multi-stage pipeline that adapts text-only datasets into multimodal formats, specifically designed to evaluate the resilience of VLMs against typographic prompt injection attacks. The Text2VLM pipeline identifies harmful content in the original text and converts it into a typographic image, creating a multimodal prompt for VLMs. Also, our evaluation of open-source VLMs highlights their increased susceptibility to prompt injection when visual inputs are introduced, revealing critical weaknesses in the current models' alignment. This is in addition to a significant performance gap compared to closed-source frontier models. We validate Text2VLM through human evaluations, ensuring the alignment of extracted salient concepts; text summarization and output classification align with human expectations. Text2VLM provides a scalable tool for comprehensive safety assessment, contributing to the development of more robust safety mechanisms for VLMs. By enhancing the evaluation of multimodal vulnerabilities, Text2VLM plays a role in advancing the safe deployment of VLMs in diverse, real-world applications.

Hot-Swap MarkBoard: An Efficient Black-box Watermarking Approach for Large-scale Model Distribution

Recently, Deep Learning (DL) models have been increasingly deployed on end-user devices as On-Device AI, offering improved efficiency and privacy. However, this deployment trend poses more serious Intellectual Property (IP) risks, as models are distributed on numerous local devices, making them vulnerable to theft and redistribution. Most existing ownership protection solutions (e.g., backdoor-based watermarking) are designed for cloud-based AI-as-a-Service (AIaaS) and are not directly applicable to large-scale distribution scenarios, where each user-specific model instance must carry a unique watermark. These methods typically embed a fixed watermark, and modifying the embedded watermark requires retraining the model. To address these challenges, we propose Hot-Swap MarkBoard, an efficient watermarking method. It encodes user-specific $n$-bit binary signatures by independently embedding multiple watermarks into a multi-branch Low-Rank Adaptation (LoRA) module, enabling efficient watermark customization without retraining through branch swapping. A parameter obfuscation mechanism further entangles the watermark weights with those of the base model, preventing removal without degrading model performance. The method supports black-box verification and is compatible with various model architectures and DL tasks, including classification, image generation, and text generation. Extensive experiments across three types of tasks and six backbone models demonstrate our method's superior efficiency and adaptability compared to existing approaches, achieving 100\% verification accuracy.

Cardiac-CLIP: A Vision-Language Foundation Model for 3D Cardiac CT Images

Foundation models have demonstrated remarkable potential in medical domain. However, their application to complex cardiovascular diagnostics remains underexplored. In this paper, we present Cardiac-CLIP, a multi-modal foundation model designed for 3D cardiac CT images. Cardiac-CLIP is developed through a two-stage pre-training strategy. The first stage employs a 3D masked autoencoder (MAE) to perform self-supervised representation learning from large-scale unlabeled volumetric data, enabling the visual encoder to capture rich anatomical and contextual features. In the second stage, contrastive learning is introduced to align visual and textual representations, facilitating cross-modal understanding. To support the pre-training, we collect 16641 real clinical CT scans, supplemented by 114k publicly available data. Meanwhile, we standardize free-text radiology reports into unified templates and construct the pathology vectors according to diagnostic attributes, based on which the soft-label matrix is generated to supervise the contrastive learning process. On the other hand, to comprehensively evaluate the effectiveness of Cardiac-CLIP, we collect 6,722 real-clinical data from 12 independent institutions, along with the open-source data to construct the evaluation dataset. Specifically, Cardiac-CLIP is comprehensively evaluated across multiple tasks, including cardiovascular abnormality classification, information retrieval and clinical analysis. Experimental results demonstrate that Cardiac-CLIP achieves state-of-the-art performance across various downstream tasks in both internal and external data. Particularly, Cardiac-CLIP exhibits great effectiveness in supporting complex clinical tasks such as the prospective prediction of acute coronary syndrome, which is notoriously difficult in real-world scenarios.